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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.004G054000.1 |
Common Name | PHAVU_004G054000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
Dof |
Protein Properties |
Length: 451aa MW: 49100.7 Da PI: 6.7415 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G054000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.1 | 2.2e-39 | 110 | 169 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++k+l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+
Phvul.004G054000.1 110 PDKILHCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHL 169
7899******************************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MSNKDPGIRL FGRKIPLPES QIPASSQMGY KIQANSATMN ACGGLKKKEV EIPYTENSEQ 60 PQNYSDSRDS EQEFPHNNNQ QENVSKVNTK TVENNTESSS TDEDKIFKKP DKILHCPRCN 120 SLDTKFCYFN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKHLA SQYQHIIVSC 180 DGVPTTNDSS CHQLVTTLQS AAVFRSSTDN EKGEEEVSLC ASASMTNACT ARNTLTEPAA 240 SKPLQCYPAP PWIIPWNQDW NNAASTASVQ PSSLHMCNPY SADPASMQWC PTPMMAVPTI 300 YPPSFPLQFV PGSYWGGQPM WGGGTGAVSM GFNACLSPTS STSNSCCSGN GSPTLGKHTR 360 DNNVSTDEEK SDMCVLVPTT LRIDDPNEAA KCPTFASSGL NPENQQCVAE GTISKRAKPR 420 EDKECVLGVS QILEANPAAI SRAHAFQEGI *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |