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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.004G053500.1 |
Common Name | PHAVU_004G053500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
MYB |
Protein Properties |
Length: 377aa MW: 41433.8 Da PI: 8.3094 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G053500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 107 | 152 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+q+G +W++Ia++++ gR++k+c++rw++
Phvul.004G053500.1 107 RGHWRPAEDVKLKELVAQFGAQNWNSIAEHLP-GRSGKSCRLRWFNQ 152
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 55.7 | 1.2e-17 | 159 | 202 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r+++++eE+e+l++a+k +G++ W+ I+r ++ gRt++ +k++w+
Phvul.004G053500.1 159 RKAFSEEEEERLLNAHKVYGNK-WAMISRLFP-GRTDNAVKNHWHV 202
789*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MSDSLHFRNG GCGFSAEMNV FPSPPVTVIG LHSFNILGVM GHVEGKKSES SDIPFQILNP 60 SVIHASQEGE ASFGVEAMSL SLKPGEELEA DSYSATGKIR HTKLCARGHW RPAEDVKLKE 120 LVAQFGAQNW NSIAEHLPGR SGKSCRLRWF NQLDPRINRK AFSEEEEERL LNAHKVYGNK 180 WAMISRLFPG RTDNAVKNHW HVIMARRQRE KSCVYKRRKP TFQILPPKDL DLTLPMNGSS 240 ESTISSTIID ESASTGTNLS FTPSSAKPTP LPFHNPCPVQ NLQAFGALMD LSGESRTTAR 300 NGSFNKHIGA WKGSCEAGHM GRLMGVDQSH CSDSNSSEIS VSESVATNKI TNLSMYEKSD 360 NRPNMLFIDF LGVGAT*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 205 | 219 | RRQREKSCVYKRRKP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 1e-180 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |