PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.004G047600.1 | ||||||||
Common Name | PHAVU_004G047600g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 201aa MW: 22459.3 Da PI: 10.1917 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.4e-15 | 119 | 170 | 2 | 52 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leel 52 + ++++rr++kNRe+A rsR+RK+a++ eLe kv++Le+eN+ L +e +e+ Phvul.004G047600.1 119 ATIQKQRRMIKNRESAARSRERKQAYTMELEYKVQQLEQENTHLVNEeAENR 170 5789**************************************9974303333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-12 | 118 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-13 | 119 | 176 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.151 | 120 | 172 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.49E-17 | 122 | 183 | No hit | No description |
SuperFamily | SSF57959 | 2.31E-11 | 123 | 167 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.7E-14 | 123 | 174 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 125 | 140 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MDDFKSIISM PTAAATAATT VDNIWNKIVA GAHPHHPAAA GDYNGGAGDY RGASALEFYE 60 GSPMENLSSS SSLPVSFSLP LPFHAQGPSS VEPFGMGTAS SNLVHRGRRR VVEEPMDKAT 120 IQKQRRMIKN RESAARSRER KQAYTMELEY KVQQLEQENT HLVNEEAENR RQRRKQLMET 180 IIPVEVMRKP RKKFGRQNSF * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.004G047600.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007151451.1 | 1e-149 | hypothetical protein PHAVU_004G047600g | ||||
TrEMBL | V7C2C4 | 1e-147 | V7C2C4_PHAVU; Uncharacterized protein | ||||
STRING | XP_007151451.1 | 1e-148 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 3e-25 | G-box binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Phvul.004G047600.1 |
Entrez Gene | 18632040 |