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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G293800.1 |
Common Name | PHAVU_003G293800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
G2-like |
Protein Properties |
Length: 403aa MW: 44488.5 Da PI: 9.2647 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G293800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 102.9 | 2e-32 | 264 | 319 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Phvul.003G293800.1 264 KQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 319
79****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MGSVPAELSL DLRPSSVPKT ITDFLRHLSS ASDRLATLHD FLARLEDELR KIHAFKRELP 60 LSMLLLNDAI SLLKAESQKC RPRDSPPALE EFIPLKKEHD RNDGNNHNDD NDNDNECRDK 120 RNWLSSVQLW NNTTTNNNAS DRKQQQQLHK LETKKIEEGQ SVGEDPFQSC SNRNGGRRAF 180 MPFSRPSSSS SSVPVATMGL AAATKEEKEE SVMNRLCLQT PSSVKEGCGS RGSRSSSNRA 240 VSSSSPPTVH PSLRASSLQQ TARKQRRCWS PELHRRFVNA LQKLGGSQAA TPKQIRELMQ 300 VDGLTNDEVK SHLQKYRLHT RRVPSASGNQ PVVVLGGLWM SQDQYNESSK VSSSGSGSPQ 360 SPLHLTAGSG GGTSPSMEDD EDARSESYSW KSHMHKPGKV DV*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 1e-13 | 264 | 317 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-13 | 264 | 317 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-13 | 264 | 317 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-13 | 264 | 317 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-162 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |