PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G281300.1
Common NamePHAVU_003G281300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 417aa    MW: 46185.7 Da    PI: 5.4227
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G281300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-10225267754
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           Er+RR ++ s+f+ L+el+P++      K + a+++  A++YI++L
  Phvul.003G281300.1 225 TTERQRRVDLSSKFDALKELIPNP-----SKSDRASVVGDAINYIREL 267
                         57*********************9.....79***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.85E-13216287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.96E-10216271No hitNo description
PROSITE profilePS5088814.094218267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-11219285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10224273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-8225267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MYEESSCFDP NGMVAEDCFS QMVSKSEAVM SVSSIQPQNT FGMENLAYTY SSGEDASAVA  60
MEIIAHPQQN SYNQVNNLNP QFVQVVNNHA SCEELYSFPP HSSTLERGHH DHQFPYSTPT  120
PDLLNLLHLP ITFENQSSNL PKPSGPMGTA DSTNVSSVSY DPFLHLNLRA PPPALRNDFA  180
FGGGGGAIEG SGIAYQDFGN GVVELTQDVG KKRGGKRTKQ FTSTTTERQR RVDLSSKFDA  240
LKELIPNPSK SDRASVVGDA INYIRELKRT VDELKLLVEK KRHEKQRVVV MMRHKVETEG  300
QEDSNLDPDD GSYNESLRSS WIQRKNKDTE VDVRIVDNEV TIKLVQRKKM DCLVHVSQVL  360
DQLNLDLQHV AGGHIGDFCS YLFNTKMCDG SCVYASAIAN KLIQVMDTSL VAESLN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G281300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156379.10.0hypothetical protein PHAVU_003G281300g
TrEMBLV7CG880.0V7CG88_PHAVU; Uncharacterized protein
STRINGXP_007156379.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.13e-80bHLH family protein