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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G260500.1 |
Common Name | PHAVU_003G260500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 331aa MW: 38413.3 Da PI: 6.6347 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G260500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 178.1 | 2.3e-55 | 6 | 135 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
+ppGfrFhPtdeelv +yL+kkv++++++l +vike+d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+
Phvul.003G260500.1 6 VPPGFRFHPTDEELVGYYLRKKVASQNIDL-DVIKEIDLYRIEPWDLKErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGR 95
69****************************.9***************953432233667******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
dk+v++ +++l+g++ktLvfykgrap+g+k+dW+mheyrle
Phvul.003G260500.1 96 DKSVYE-RTKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 135
******.999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MMESCVPPGF RFHPTDEELV GYYLRKKVAS QNIDLDVIKE IDLYRIEPWD LKERCRIGYE 60 EQNEWYFFSH KDKKYPTGTR TNRATMAGFW KATGRDKSVY ERTKLIGMRK TLVFYKGRAP 120 NGQKSDWIMH EYRLETLENG PPQEEGWVVC RAFRKRTNGQ TKSIEGWDRS YIYDEQARGV 180 NSSVNPIDLM LRQPQRNQIT AKSFLYKQEI EADNNLRLMH AEGVMQLPQL ESPSMPLLIS 240 ENINNENGSP EELSNTKKVT DWRALDKFVA SQLSQEERHE IEGMSSFATH HTGSDMALLL 300 LQNTNERNKF NPFLNTSSSD CDIGICVFEK *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:25148240}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by chitin (e.g. chitooctaose) (PubMed:17722694). Accumulates in plants exposed to callus induction medium (CIM) (PubMed:17581762). {ECO:0000269|PubMed:17581762, ECO:0000269|PubMed:17722694}. |