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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G254200.1 |
Common Name | PHAVU_003G254200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ZF-HD |
Protein Properties |
Length: 322aa MW: 36026.5 Da PI: 8.823 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G254200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 104.5 | 6.8e-33 | 111 | 168 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
++vrY+eClkNhAa +Ggh++DGCgEfmps geegt++++kCaAC+CHRnFHR+e+e e
Phvul.003G254200.1 111 ATVRYRECLKNHAAIMGGHVTDGCGEFMPS-GEEGTPESFKCAACECHRNFHRKEPEGE 168
589**************************9.999*********************9875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MDMREQDKVI EMPGTLGYNL PNTNSSSSKL SSLIGERSDQ PPQSHTLVFS DPPQTNSHHH 60 RRLNPPNSLP PNPLQLPHPH RPRRDLDPTA ISPPIVTTSR TQPHSTGTFT ATVRYRECLK 120 NHAAIMGGHV TDGCGEFMPS GEEGTPESFK CAACECHRNF HRKEPEGESS QHVLNYHLTY 180 PNKTNRNIVI HSPQSHLQLP THHLHGVVAT PSGGSVQPAV LGFGGTPTES SSEDLNMFQT 240 DEAGQLLSVQ PPLSSSKKRF RTKFSQQQKD QMMEFADKLG WKIQKQDEQE LHQFCSQVGV 300 KRQIFKVWMH NSKQAMKKKQ M*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |