 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.003G252200.1 |
Common Name | PHAVU_003G252200g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
GRAS |
Protein Properties |
Length: 545aa MW: 60610.7 Da PI: 6.5918 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G252200.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 287.3 | 4.3e-88 | 179 | 543 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
+e L+++A++++s++++laqa+L+rl+++ +sp ++p++R+a++f+ AL++ l++s +a + + +s + +++++ +k+fs +sPi
Phvul.003G252200.1 179 IEELIRAADCFDSSHFQLAQAILERLNNRliRSPMAKPLHRAAFHFKDALHSILSGSN----RAGSNRLSSMAEIVQTIKTFKAFSGISPI 265
679************************9999************************933....34455555555699*************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+ fs +t+Nqa+le ++g++ vH+iDf+i+ G+Q+++L++++a+++ + +p lRiT+v+++e + e + ++e+L++fA+ lg++ + ++
Phvul.003G252200.1 266 PMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAaGASPLLRITAVVPEE--YAVESRLVRENLNQFAHDLGIRAQVDF 354
*********************************************977899*********66..99999********************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalf 268
+ +++e++++++ r+ gE++aV l+ +++ l + ++ ++L v+++ P vvv+v+ e ++ ++sF ++++++le+ys+++
Phvul.003G252200.1 355 VPLRTFETVSFKAVRFVDGEKIAVLLSPSIFCRLGSGGANVG---AFLADVRRMAPGVVVFVDGEgwTEAtAAASFRRGVVNSLEFYSMML 442
9999*****************************977776666...********************553334677***************** PP
GRAS 269 dsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
dsl+a++++ e+ + +E ll+++i +v + ++ + Wre++ aG++pv+ls++a qa++ll+kv+ +g++v++++++
Phvul.003G252200.1 443 DSLDASVAAGGggEWVRRIEMLLLRPKIFAAVESARRR-------APPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAE 526
******9998888999*************999876665.......89******************************************** PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
lvl+W++r++v++SaWr
Phvul.003G252200.1 527 LVLCWHERAMVATSAWR 543
****************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MRVPSSPQPN THSPNPNLLL HTLPNTTNPT FTYEPTSVLD LCRSPSPEKK PTVPKPEPQH 60 NTNNITTITT TNNNNLDLDD HVLPNSDWWE SIMKDLALPE DSPTPLSKPN NINPCIPDFP 120 PSHDPPFDHP PDFTSLSEIY NQNLPYNYTT TNALDHSFQD LNHHHHNPTN NVNNNWDFIE 180 ELIRAADCFD SSHFQLAQAI LERLNNRLIR SPMAKPLHRA AFHFKDALHS ILSGSNRAGS 240 NRLSSMAEIV QTIKTFKAFS GISPIPMFSI FTTNQALLET LNGSSFVHVI DFEIGLGIQY 300 ASLMKEIAEK AAGASPLLRI TAVVPEEYAV ESRLVRENLN QFAHDLGIRA QVDFVPLRTF 360 ETVSFKAVRF VDGEKIAVLL SPSIFCRLGS GGANVGAFLA DVRRMAPGVV VFVDGEGWTE 420 ATAAASFRRG VVNSLEFYSM MLDSLDASVA AGGGGEWVRR IEMLLLRPKI FAAVESARRR 480 APPWREAFYG AGMRPVQLSQ FADYQAECLL AKVQIRGFHV DKRHAELVLC WHERAMVATS 540 AWRC*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |