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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.003G246800.1 |
Common Name | PHAVU_003G246800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
LBD |
Protein Properties |
Length: 177aa MW: 19594.5 Da PI: 7.3385 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G246800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 113.4 | 1.5e-35 | 3 | 102 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C aCk++rr+C +dC +apyfpae+ ++fa+vh++FG nv+++lk++++e r+ ++++l+y+Aear+rdPv+G+vgvi + ++ l+ lk
Phvul.003G246800.1 3 PCGACKYQRRRCGADCLMAPYFPAESIQRFAYVHHVFGGGNVSNILKSTKPELRKWTARALTYQAEARVRDPVHGCVGVICEQEESLRILK 93
7****************************************************************************************** PP
DUF260 92 aelallkee 100
++l+++k+e
Phvul.003G246800.1 94 EKLEKAKRE 102
***999876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MTPCGACKYQ RRRCGADCLM APYFPAESIQ RFAYVHHVFG GGNVSNILKS TKPELRKWTA 60 RALTYQAEAR VRDPVHGCVG VICEQEESLR ILKEKLEKAK REVAKYVGPE VMQKMIEQCS 120 SYPHANMVDL EAPLAITIDD ADLSSWDPFP AWEPAFSRLQ PPQGGDAKGE TIAPPS*
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