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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G232300.1 |
Common Name | PHAVU_003G232300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
MYB |
Protein Properties |
Length: 324aa MW: 36446 Da PI: 7.1524 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G232300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.2 | 2.8e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l+ +++ +G+g +W + ++++g++R++k+c++rw++yl
Phvul.003G232300.1 14 RGPWSPEEDAKLKSYIEDHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
89*********************************************97 PP
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2 | Myb_DNA-binding | 37.6 | 5.2e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++
Phvul.003G232300.1 69 GGFSEEEDNIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
569******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE DHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGK 120 QRKEQHAHAR RVGGLKQEIK RESEDLMLPV GVISRTPCWP HEQNSWPIPV ANACLQYYDL 180 NNKTSSIVHI PDNTVTATMN SQYSSFDISL TQDQLYPSTG NMITTDTCHT SNVFQGFGNF 240 SSDFACVNSQ QMDGSELVFY GMESMEIANG STNTNSTEST SWGDIISSMV YPPLVSHYEA 300 CQQRIMPQDV TFEESSYFAM RTQ*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator (By similarity). Positively regulates axillary meristems (AMs) formation and development, especially during inflorescence. {ECO:0000250, ECO:0000269|PubMed:16461581}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |