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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G228600.1 |
Common Name | PHAVU_003G228600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ARR-B |
Protein Properties |
Length: 560aa MW: 62384.7 Da PI: 6.7295 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G228600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 83.8 | 1.8e-26 | 316 | 370 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH++Fv+aveqL +++A+P++ilelmkv+gLt+++v+SHLQkYR++
Phvul.003G228600.1 316 KMKVDWTPELHKKFVKAVEQL-SIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 370
5689*****************.9*******************************96 PP
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2 | Response_reg | 26.2 | 4.1e-10 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedale 88
vl+ + + + + +r le +y +v ++ d eal + +++ ++ ++ + G+++l+ +++ +lp i+ + + +++ +
Phvul.003G228600.1 20 VLLLEGDSISAAEIRAKLEAMDY-NVSTFCDENEALSAISSTPesFHIAIVEVSSSSsEGGFKFLE---NAK-DLPTIMTSNNHCLNTMMK 105
567777778888899999*****.***************666666********9999445566654...444.899**9999999****** PP
HHHTTESEEEESS--HHHHHH CS
Response_reg 89 alkaGakdflsKpfdpeelvk 109
++ +Ga +flsKp ++++l +
Phvul.003G228600.1 106 CIALGAVEFLSKPLSEDKLKN 126
*****************9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 560 aa
Download sequence Send
to blast |
MVFTANDLQE WKDFPKGLKV LLLEGDSISA AEIRAKLEAM DYNVSTFCDE NEALSAISST 60 PESFHIAIVE VSSSSSEGGF KFLENAKDLP TIMTSNNHCL NTMMKCIALG AVEFLSKPLS 120 EDKLKNIWQH VVHKAFSSGT SILCESLKPV KESVVPMLQL QKDNEQHESS VSIDIEKVSR 180 FTDNDHVLSP GNDKYPAPST PQLMHGTRLL DDGDCQEQTN CSTEKESGEH DGESKSVETT 240 CGNLNAETES TAQERKSEIT LARKEVDLVD TSKGESVASL HTQKRKVVSN TDKNTKSPNK 300 VGVRSDSCEI RPSRKKMKVD WTPELHKKFV KAVEQLSIDQ AIPSRILELM KVEGLTRHNV 360 ASHLQKYRMH KRQIFPKEED RKWLNQRERS YCLQRPIMAF PPYHSNHTLP LAPVYPMWGQ 420 SSSQTAGMQI WSSPGYPLWQ PTAENWHWKP FPRMHADAWG CPVLPVPPPP QAPFPYSQNM 480 PALLNADAAD HTFTMPQSSL EHYPAQEVVD KVVKEAVSKP WLPLPLGLKP PSTDSVLAEL 540 SRQGISSIPP RSSKGSNSG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |