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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G223600.1 |
Common Name | PHAVU_003G223600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 206aa MW: 22308.9 Da PI: 4.5871 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G223600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 45.5 | 1.8e-14 | 47 | 94 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G r ++ +g+Wv+eIr+p++ +kr++lg++ ae+Aa+a++ a+++l+g
Phvul.003G223600.1 47 YRGTR-CR-SGKWVSEIREPRK---TKRIWLGTYPAAEMAAAAYDVAALALKG 94
66665.55.6*********843...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MDDNPFPNVP LPPPPIQVPD NFFLSSSSSP TPTTSSPSPT PSTAFRYRGT RCRSGKWVSE 60 IREPRKTKRI WLGTYPAAEM AAAAYDVAAL ALKGPDTPLN FPNSILSYPI PASLSATDIR 120 AAAAAAAQAR IVRAPQESGQ AVNPHIGQEL ERREEYYDED ELLNMPNLLD EMARGMQVSP 180 PRISSFSSDD SPGNSDGDNL WSYTL*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |