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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G180000.1 |
Common Name | PHAVU_003G180000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 253aa MW: 28553.8 Da PI: 9.9263 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G180000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 47.6 | 4.1e-15 | 91 | 140 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grW AeI++ s ++ r +lg+f+ aeeAa a++ a++ l+g
Phvul.003G180000.1 91 KFLGVRQRP-SGRWIAEIKESS---QKLRLWLGTFDKAEEAALAYDCAARLLRG 140
789******.7******99932...36**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MKKENESVTV TKKVFSVSRF LFNHSVLPND GEIYKDTLTL KMLFGFKYTS KLSHQSHNPN 60 KNLPLMPIEI DKSYEKRVMK IPKVGKKIEK KFLGVRQRPS GRWIAEIKES SQKLRLWLGT 120 FDKAEEAALA YDCAARLLRG RNAKTNFPNP GTMNTHEEDY SILGKNPRSY QLLRHAVMKN 180 HALSTSLYST FMPWKNQIMT RDEHDTLVEE TVVCSIPEQG SGCCGISFGS SKVYSSVVVA 240 PSFSASSHDE TP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |