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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G156300.1 |
Common Name | PHAVU_003G156300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 505aa MW: 54728.2 Da PI: 9.374 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G156300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 79.5 | 3.7e-25 | 194 | 250 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ ++v+ei+Y++eH h+
Phvul.003G156300.1 194 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCFAKK-IECCDHSGHVIEIVYKSEHSHD 250
7********************************98.*********************7 PP
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2 | WRKY | 96.4 | 1.9e-30 | 367 | 423 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + ++ ++v+itY+g H+h+
Phvul.003G156300.1 367 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHD 423
9*******************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 505 aa
Download sequence Send
to blast |
MAERRSPQAL PEPHPKPNDS DREPHDANQT QRLTESPSAA ESQRVELRSS DERRTESNLE 60 TLGGAVTSSV QTLAVQHHRS DDLQGSSAAS NSSGKAESKE TVAPPEKEII QRGAAQPLPT 120 QTNRLQLSVC STPLSELPPA SVTQSLSSVS SPTAPKQKLS TPKVNNAHLP EVDKKNPSGG 180 KALSAVSVAR SSASDGYNWR KYGQKQVKSP TGSRSYYRCT HSDCFAKKIE CCDHSGHVIE 240 IVYKSEHSHD PPRKTNSLRE NKFLSASEPI VENSVPDQPV RLLKDPDPSI SSKESLQGPC 300 SSDKKRPNSS SISGNGKVIL KEEHVNEPEP KKRMKKGDLT DMDSPVKPGK KPKFVIHAAG 360 DVGISGDGYR WRKYGQKMVK GNPHPRNYYR CTSAGCPVRK HIESAVDNSD AVIITYKGVH 420 DHDMPVPKKR HGPPSAPLVA AAAPTSMNSL QVKKPDSPHN KKVSTQWSVD TEGELTGEAL 480 ELGGEKAMES ARTLLSIGFE IKPC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031228 | 0.0 | KT031228.1 Glycine max clone HN_CCL_111 WRKY transcription factor (Glyma02g36510.1) mRNA, complete cds. |