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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G124000.1 |
Common Name | PHAVU_003G124000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 400aa MW: 44013.8 Da PI: 9.0233 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G124000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86 | 3.5e-27 | 180 | 237 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg+ WrKYGqK kg+++pr+YYrC + Cpv+k+v+r+a+d++v+++tYeg+Hnh+
Phvul.003G124000.1 180 DGCLWRKYGQKISKGNPCPRAYYRCNMGtACPVRKQVQRCATDESVMITTYEGNHNHS 237
9**************************98****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MKDKVAFKNL LEVQKKASVS NTDALNWTQE PSITTTLGST LLGLRLNNFE LPQNLEQQPL 60 NQLGLLQIEL EEVKKENQNL RSMLNKITEH YAALQNQLLL AMRPKKLSSS PQNNEDMQKD 120 SRQDNVKKPG LPSWQFLHSG KMNKQVTQQE AKMIEEQAFE ASCKKARVSI RARSESLKGD 180 GCLWRKYGQK ISKGNPCPRA YYRCNMGTAC PVRKQVQRCA TDESVMITTY EGNHNHSLPQ 240 AARSMACTTS AALTMFLSGS TTSSHATTFS NHDLFSSLSA STHYPSASSS LTVTLDLTQP 300 PKNYPKFLTA TALSSSHSQT FPLSLNGYPQ QCEGLPLEKE LPLVDVLSAA ITRDPSLRAA 360 LEAAVSSLVG DSQNISNHGQ LSRSDYDPSS KMSAEASRI*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 2e-48 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |