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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G116300.1 |
Common Name | PHAVU_003G116300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 399aa MW: 43379 Da PI: 6.2356 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G116300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 105.9 | 2.1e-33 | 209 | 267 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt+a C vkk+vers+edp+vv++tYeg+H+h+
Phvul.003G116300.1 209 LDDGYRWRKYGQKAVKNSPHPRSYYRCTTAACGVKKRVERSSEDPSVVVTTYEGQHTHP 267
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MEEKREKEAN SKSSSTMANS VAFSDEIPNM TMTMSFPFSP AFSTIFDIMP PLPPPPSSSF 60 SHDPKAPNFA FLDLLAVPDY TPSLFDWPQN TALTSPPPPP PPTQITHPLP SPASSNVPDG 120 GSEVLNTPPS PNYSSISSSS NEAAAAAANK ATGNEDEAEE DETTTDAAGK GEDQDQDKSK 180 NQLKPKKKHQ KKPREPRFAF MTKSEVDHLD DGYRWRKYGQ KAVKNSPHPR SYYRCTTAAC 240 GVKKRVERSS EDPSVVVTTY EGQHTHPCPA TSRASLGFLH SEPSVLGPTS GLFMLPQQHQ 300 QFRHDQAQAQ AQAQAQVAML YNSTTTSSPS SHLNVVNSAT CVNNYANASS LSGFFQCQEN 360 ERGFAPSSMR GPHQGLFNGL LQDIVPTQMM SEERGDRV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |