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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G060700.1 |
Common Name | PHAVU_003G060700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bHLH |
Protein Properties |
Length: 481aa MW: 54048.3 Da PI: 8.7815 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G060700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42.5 | 1.2e-13 | 296 | 339 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
Er+RR++i++++++Lr+l+Pk +K++ a+iL Av+YIk+Lq
Phvul.003G060700.1 296 VTERNRRKKIKNGLFTLRSLVPKI-----TKMDRAAILADAVDYIKELQ 339
57*********************7.....7******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 481 aa
Download sequence Send
to blast |
MSGLGVVEWL RPLVETNIWD YVVVWKYGDD PTRFIEWIGC CCRGSCSVNL GVMSKEEKGE 60 VCHLAPICRD KYLQHHVRTK ACEALAQLPF ALSLYSGVHG EVAISQQSRW LTKDSIGTQV 120 LIPIVGGLIE LFTEKLIPMD MNIIELITAH GCVSLKQEAI SAQSYTCLNI IEHLPLTEQY 180 SHRWLPHMSA TLTPSIHQPA TKQCTSHPSI EGPPSGSNPS IEEPSFDSKF VGLIPDEHLK 240 QSAKMSPIPK TKMSKYNKTS GKQQRGLSSH CSDGEEDKSK LVKEPQKEGY QAKNLVTERN 300 RRKKIKNGLF TLRSLVPKIT KMDRAAILAD AVDYIKELQT QMKELKDEVR ALEVQDREKN 360 TPQPRKAAVN EQEGTRSSTL NQSSSDCTKK MPMEKVQVEV HHISKKDFLV KLYCEQKQGR 420 FSKLMEAIHS IGLQVASANI MTFDAKVLNI LTVKATNKDI HPTKLKEYLI QKTSDDRQSR 480 *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |