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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G045600.1 |
Common Name | PHAVU_003G045600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 237aa MW: 27026.7 Da PI: 9.159 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G045600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 176.1 | 9.9e-55 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+v+yL++++++k++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfFs+r++ky++g r+nrat sgyWkatg+dk+
Phvul.003G045600.1 9 LPPGFRFHPTDEELIVYYLCNQATSKPCPA-SIIPEVDIYKFDPWELPEKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKA 98
79****************************.89***************99999************************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++s +++++g+kk Lvfykg+ pkg ktdW+mheyrl
Phvul.003G045600.1 99 IYS-GSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRL 134
***.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MEGRTSSVLP PGFRFHPTDE ELIVYYLCNQ ATSKPCPASI IPEVDIYKFD PWELPEKTDF 60 GENEWYFFSP RERKYPNGVR PNRATVSGYW KATGTDKAIY SGSKHIGVKK ALVFYKGKPP 120 KGLKTDWIMH EYRLIGSRRQ TNRQMGSMRL DDWVLCRIYK KKNVGKSLEA KEDYPIAQIN 180 LTPPNNGTEQ EVVKFPRTSS LTHLLDMDYL GPISHILSDA SYTSTFDFQL NTVNGG*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-72 | 5 | 166 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-72 | 5 | 166 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-72 | 5 | 166 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-72 | 5 | 166 | 13 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swm_B | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swm_C | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swm_D | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swp_A | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swp_B | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swp_C | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
3swp_D | 5e-72 | 5 | 166 | 16 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-72 | 5 | 166 | 13 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-72 | 5 | 166 | 13 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ028769 | 0.0 | DQ028769.1 Glycine max NAC domain protein NAC1 (NAC1) mRNA, complete cds. |