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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G028800.2 |
Common Name | PHAVU_003G028800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bZIP |
Protein Properties |
Length: 437aa MW: 48379.8 Da PI: 7.0908 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G028800.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 24.6 | 5.4e-08 | 176 | 198 | 3 | 25 |
XXCHHHCHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKk 25
+ k rr+++NReAA++sR+RKk
Phvul.003G028800.2 176 DQKTLRRLAQNREAAKKSRLRKK 198
56889*****************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MKNMQGFKTA QPSSQLYCHS SFLLRGNDAN RNPTTGLCDL GDLHHSSAVF HQEDGVDLGS 60 SSMYSVKSNN VVGGSNMQYG TLSTNVGSSE IGSSGGGCMD TGLQLMYHKG VVMPTLPLGN 120 GHVDNWADSG IADNSQHTDD TSTDIDTDDR IQCNRVKNGS RMVMHSKDKT KVKPEDQKTL 180 RRLAQNREAA KKSRLRKKGI CIAAEGDQGR LAVGNGALAF DMDYAHWVDE HQRLLNDLRL 240 AINSQMSDDE LHILVEGVME HYNDLFRLKR IGAKADIFHI LYGMWKSPVE RRFMWLGGFR 300 SSELLKIIMN HLEPLTEQQL FGICTLQKSS LQSEDALNQG MEALQQYLVE TLSSTSLGPT 360 GCGNVADYMG QMALAMGKLG ELEGLLHQAD LLKQHTLQRL QQILTTRQTA RALLVQNDFI 420 SRLRALSSLW LARPRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-108 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |