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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G028800.1 |
Common Name | PHAVU_003G028800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bZIP |
Protein Properties |
Length: 463aa MW: 51489.3 Da PI: 7.0911 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G028800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 176 | 218 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k rr+++NReAA++sR+RKka++++Le+ +L + ++L
Phvul.003G028800.1 176 DQKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVKLVQLEQEL 218
56889*************************8666665555444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MKNMQGFKTA QPSSQLYCHS SFLLRGNDAN RNPTTGLCDL GDLHHSSAVF HQEDGVDLGS 60 SSMYSVKSNN VVGGSNMQYG TLSTNVGSSE IGSSGGGCMD TGLQLMYHKG VVMPTLPLGN 120 GHVDNWADSG IADNSQHTDD TSTDIDTDDR IQCNRVKNGS RMVMHSKDKT KVKPEDQKTL 180 RRLAQNREAA KKSRLRKKAY VQQLENSRVK LVQLEQELQQ ARQQGICIAA EGDQGRLAVG 240 NGALAFDMDY AHWVDEHQRL LNDLRLAINS QMSDDELHIL VEGVMEHYND LFRLKRIGAK 300 ADIFHILYGM WKSPVERRFM WLGGFRSSEL LKIIMNHLEP LTEQQLFGIC TLQKSSLQSE 360 DALNQGMEAL QQYLVETLSS TSLGPTGCGN VADYMGQMAL AMGKLGELEG LLHQADLLKQ 420 HTLQRLQQIL TTRQTARALL VQNDFISRLR ALSSLWLARP RE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-108 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |