PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G016700.1
Common NamePHAVU_003G016700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 331aa    MW: 36522.4 Da    PI: 7.2334
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G016700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-115199254
                        HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        ++ +  rE+ RRdr+N+ f+eL   l ++     +K++Ka+iL+++v+ +k+L
  Phvul.003G016700.1 51 KVLKADREKLRRDRLNEHFQELGNTLDPD----RPKNDKATILTETVQMLKDL 99
                        566789********************997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.27E-1347120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-847104No hitNo description
PROSITE profilePS5088813.5864999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-1250121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-95199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-755105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDHPNPPHST TPKHASDSLR RATPSSNRFR TLREREGTGE GEKEDPSASR KVLKADREKL  60
RRDRLNEHFQ ELGNTLDPDR PKNDKATILT ETVQMLKDLA AEVSRLKTEH KALSEESHEL  120
MQEKNELREE KTSLKSDIEN LNAQYQQRVR IMFPSWSAID HSVVINPPYS YPLPIPIPPA  180
PISIHPSLQP FPFFGNQNPH HIPSPCSMYV PYSTPSNAPV EPPSVLYAST SHVSNQRESF  240
SKSSGDRRPS SDAERCSKSH DVATELELKM PGSSSTQQGC TSGGRKGKHS VIEDRTIIGG  300
SAGSASSHYS SSQGLQDSSN SVGDIPKTDN *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G016700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007153217.10.0hypothetical protein PHAVU_003G016700g
SwissprotQ9LT236e-73BH121_ARATH; Transcription factor bHLH121
TrEMBLV7C8I60.0V7C8I6_PHAVU; Uncharacterized protein
STRINGXP_007153217.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-66bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]