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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.003G014800.1 |
Common Name | PHAVU_003G014800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
C2H2 |
Protein Properties |
Length: 227aa MW: 24842.8 Da PI: 6.6762 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.003G014800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.6 | 0.0004 | 89 | 111 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
Phvul.003G014800.1 89 FSCNYCRRKFFSSQALGGHQNAH 111
89*****************9988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MMKPNLNLEP EDDSKMYSQE GSDESHDFTM DNTSSSCLTK ADPDSGSLSL DLTLNFNLSD 60 EELKGATSHT NSESGGETHA SAIAVPRVFS CNYCRRKFFS SQALGGHQNA HKRERTLAKR 120 AMRMGMLTER YTSLASLPLH GSAFRSLGLE AHAAMHQAHL HTLRAPDMMA AAKFRKDYLR 180 TPIFVEDDDA GVFWPGSFRQ IDGSTRFVAA APPAQTSASP DLTLRL*
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Functional Description ? help
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Source |
Description |
UniProt | Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development. {ECO:0000269|PubMed:24808098}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-166 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |