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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G316500.1 |
Common Name | PHAVU_002G316500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 318aa MW: 35751.1 Da PI: 7.2133 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G316500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 172.5 | 1.3e-53 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL +kv++ +++ +v++ vd++k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat+sgyWk+tgkdke
Phvul.002G316500.1 5 LPPGFRFHPTDEELITYYLLRKVSDISFTS-KVVAVVDLNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKE 94
79*************************999.89***************988999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v+ +g l+g+kktLvfy grap+gek++Wvmheyrl
Phvul.002G316500.1 95 VFG-GGVLIGMKKTLVFYMGRAPRGEKSNWVMHEYRL 130
***.*******************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MEENLPPGFR FHPTDEELIT YYLLRKVSDI SFTSKVVAVV DLNKSEPWDL PGKASMGEKE 60 WYFFSLKDRK YPTGLRTNRA TESGYWKTTG KDKEVFGGGV LIGMKKTLVF YMGRAPRGEK 120 SNWVMHEYRL QNKQPYRSSK EEWVICRVFQ KSSAPKKSQQ TSSSQPSEES PTSMVNEFGD 180 ADLPNLNATI ANSSTIAGQQ TYNNGDPINV NTNMNLTMNW PSATDLPSLP WPSGLLLNPN 240 LSVNSLLLRA LQLRSTYHHQ REAATSDHHF ATYVPQTFPH NDIGTDNLTP NLSASASSRA 300 LESCVLQEQP FNMDSIW*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-57 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 6e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 6e-57 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 6e-57 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-161 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |