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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.002G269800.1 |
| Common Name | PHAVU_002G269800g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 482aa MW: 54572.2 Da PI: 4.4838 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.002G269800.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 265.4 | 1.9e-81 | 112 | 470 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
+lLl+ Aeav++++ +la+ ++++l++ +s + ++Rla +ft++L + ++ +el + ++s+ ++++ ++++++e+sP+
Phvul.002G269800.1 112 ADLLLTGAEAVEAHNWALASDIIEKLNKASSLETgdGLLNRLALFFTQGLYYKSTN-APELLQRGAVSTH-----TNAFCVFQILQELSPY 196
679**************************88765434689************9998.6777766555555.....478889999******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
+kf+h+taNqaIlea+eg+e vHiiDfdi++G+QWp+L+ La R+ ++ slR+ ++ ++ + + ++tg+rL++fA++++ pf f+ +
Phvul.002G269800.1 197 VKFAHFTANQAILEATEGAENVHIIDFDIMEGIQWPPLMVDLAMRK-STTSLRVSAITV-DQRGAASAQQTGRRLKEFAASINFPFVFDQI 285
*********************************************5.569********9.55689999*********************** PP
GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalf 268
+++r ed++ eL + +l+Vn+++ + ++++s sl + ++L+ v +lsP++vv+ve+e + + s sF+e f+eal++y+al
Phvul.002G269800.1 286 MMEREEDIQGIEL----DQTLIVNCMI-HQWMPNRSFSLVK---TFLDGVTKLSPRLVVLVEEElfnfSRLKSMSFVEFFCEALHHYTALC 368
9999999987777....789******9.5667888899988...********************8775556999***************** PP
GRAS 269 dsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
dsl+++l + e++ +E+e+lg +i + v er+er+ W+e + + GF+ vp+s+ + +qak l++ ++ gy v+ e+g
Phvul.002G269800.1 369 DSLASSLWGSHkMEMTLIEKEILGLRILDSVREFPCEREERKV----WEEGFYSlKGFRCVPMSTCNISQAKFLVSLFG-GGYWVQFEKGR 454
***77765554389999********************888877....***997758***********************.89********* PP
GRAS 358 lvlgWkdrpLvsvSaW 373
l l+Wk+rpL+++S W
Phvul.002G269800.1 455 LALCWKSRPLTVASIW 470
**************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MDYEQFDFSF GPPYMNQLHE CCLENAFPFQ TEDISSPNTI LDEMFGEESL ELLLQHTNNQ 60
DFGFMNHNDP LEIEFCDGFA LSSEENVHVA MEEGDSYLKG IQAELVEPTS LADLLLTGAE 120
AVEAHNWALA SDIIEKLNKA SSLETGDGLL NRLALFFTQG LYYKSTNAPE LLQRGAVSTH 180
TNAFCVFQIL QELSPYVKFA HFTANQAILE ATEGAENVHI IDFDIMEGIQ WPPLMVDLAM 240
RKSTTSLRVS AITVDQRGAA SAQQTGRRLK EFAASINFPF VFDQIMMERE EDIQGIELDQ 300
TLIVNCMIHQ WMPNRSFSLV KTFLDGVTKL SPRLVVLVEE ELFNFSRLKS MSFVEFFCEA 360
LHHYTALCDS LASSLWGSHK MEMTLIEKEI LGLRILDSVR EFPCEREERK VWEEGFYSLK 420
GFRCVPMSTC NISQAKFLVS LFGGGYWVQF EKGRLALCWK SRPLTVASIW VPKGYSSDKV 480
K*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
