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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G237300.1 |
Common Name | PHAVU_002G237300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 247aa MW: 27875.3 Da PI: 8.3028 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G237300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53 | 8.8e-17 | 26 | 75 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr++ +g+W+AeI+d s k+ r +lg++ taeeAa+a+++a+ l+g
Phvul.002G237300.1 26 KFVGVRQRA-SGKWAAEIKDTS---KKIRMWLGTYQTAEEAARAYDEAACLLRG 75
799***999.7*********42...36**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MGVEDQKQRA KDERLCEKVK MKNKRKFVGV RQRASGKWAA EIKDTSKKIR MWLGTYQTAE 60 EAARAYDEAA CLLRGSNTRT NFSTQSSTTI STNSPISLKL TNLLHRKAMS NQTQLQNHPS 120 AITPTFQGAT APNNIMVMEQ TSASSGQAQS LFVVQNQVSN NLYGLDMNMI DCAMGITQNA 180 SQLHFSWPLA QQRINELPLS KDGFNLEGQL SDSVYATNEY HHLEDTYEYK YEYDVNYPLS 240 HFFCFT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in symbiotic nodule signaling in response to rhizobial Nod factors (NFs). Binds to the GCC box (NF-responsive box) of ENOD11 promoter. May act as transcriptional repressor of NF-responsive box-containing target gene promoters in root hairs. {ECO:0000269|PubMed:17827349}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by Nod factors in root hairs. {ECO:0000269|PubMed:17827349}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-180 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |