 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.002G230200.1 |
Common Name | PHAVU_002G230200g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
Dof |
Protein Properties |
Length: 348aa MW: 37110.1 Da PI: 8.9542 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G230200.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.4 | 1.8e-39 | 45 | 105 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
Phvul.002G230200.1 45 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 105
7899******************************************************976 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MVVVTPPTAS NKWTQLSSLA SQIDDRKASM GRVMEKPTQD LLQQQQQALK CPRCDSSNTK 60 FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NKRVKRPNGD ASANSPPSSS 120 TPSSNSNPPS RPHIPSSSTA NHVNVNPLFY GLPNSNGCDV MDVPFPRFNL QSQLNALGLG 180 FSSGVNVISS EPSDNGFSTT TTTSNTNNFL SAYNSIFGSS SSSTCAPSTP VMASLLSSTL 240 LQQKFIGGAG VKGHHDGNGF QGFAPLQGLQ MEGSNNISSK EVKAEGPNRL ELEWSNNNNN 300 NGGGGACQNQ MEHVGLSDPN SLYWNTATGL SAWSDQPNFG PSVTSLI*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |