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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G196800.1 |
Common Name | PHAVU_002G196800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 359aa MW: 39121 Da PI: 7.058 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G196800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.2 | 1.6e-33 | 185 | 242 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
Phvul.002G196800.1 185 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHP 242
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MSVEPKELYY QDLVLDHNNQ QGTGAGGGGS DMYEKHFSSS LIPAGSTPYD SQPFDPSYMT 60 FTDCLQGAMD YNSLATSFGL SPSSSEVFSS VEGNHKPAEG GDGGVGSGGS ETLATLNSSI 120 SSSSSEAGAE EDSGKSKKDR QVKPEEEGGG GENSKKGHKD KKKGEKKQKE PRFAFMTKSE 180 VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTQKCTVKKR VERSFQDPTT VITTYEGQHN 240 HPVPTSLRGN AAAGMFTPSL LATPTPLAAG SNFPQDLFLH MHHHHPHHHF HNTLFSTQST 300 NAVTTTTTTV TTAATPPSIY SSYNINNSLL HNQYLPSEYG LLQDIVPSMF HNKTHPQN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |