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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.002G165500.1 |
| Common Name | PHAVU_002G165500g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 476aa MW: 53138.6 Da PI: 6.1062 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.002G165500.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 449.8 | 1.8e-137 | 49 | 472 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lL+ cA++v++g+le+a+ lL+++s+laspdgd++qR+aayft+ALa r+++++++l +al++++ + +s+e+ ++klf+e++P+l
Phvul.002G165500.1 49 LIHLLIGCANHVANGSLENANMLLEQISQLASPDGDTIQRVAAYFTQALADRILKTWPGLHRALNSTRIA--MVSDEILVQKLFFELFPFL 137
689*************************************************************999988..69***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
k+s++++NqaI+ea+ege++vH+iD++++ ++QW+aLl+ L++Rpeg+p+lRiTgv++ +ke l +++++L++ Ae+l++ f+fn+ v
Phvul.002G165500.1 138 KMSYILTNQAIVEAMEGEKMVHVIDLSATGPAQWIALLRVLSARPEGSPHLRITGVHH----QKEVLDQMAHKLTEEAEKLDIAFQFNP-V 223
**********************************************************....9**************************.7 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrll........................................................... 214
++++e+l++++Lrvk+gEala++++lqlh+ll
Phvul.002G165500.1 224 VSKIENLDFDKLRVKTGEALAISSILQLHSLLaldddasrrrssnnsnaiqlqkilqmnpntrgdlaekdmvhgyspspdsasasassspg 314
99*************************************************************************************9988 PP
GRAS 215 desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
++s+s++s +++L+++++lsPk++vv+eq+ +hns+++++r+le+l+ y+alfd+le +++r+s +rik+E++llg+ei+n+vacegaer
Phvul.002G165500.1 315 SSSASMKS--ESFLNALWGLSPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRASLDRIKIEKMLLGEEIKNIVACEGAER 403
77788877..99******************************************************************************* PP
GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
rerhe++ kW +rl+ +GF +vp+s++ ++qa + l++++ +gyr+ ee+g++v++W+dr+L+sv+aWr
Phvul.002G165500.1 404 RERHEKMDKWIQRLDLSGFANVPFSSQGVTQAMRFLENYGCNGYRMREENGCAVIYWQDRTLFSVTAWR 472
********************************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 476 aa
Download sequence Send
to blast |
MESVFQEEGS SSVTSSPLQF FSMMSLSPGI GSPYPWLREL KSEERGLYLI HLLIGCANHV 60
ANGSLENANM LLEQISQLAS PDGDTIQRVA AYFTQALADR ILKTWPGLHR ALNSTRIAMV 120
SDEILVQKLF FELFPFLKMS YILTNQAIVE AMEGEKMVHV IDLSATGPAQ WIALLRVLSA 180
RPEGSPHLRI TGVHHQKEVL DQMAHKLTEE AEKLDIAFQF NPVVSKIENL DFDKLRVKTG 240
EALAISSILQ LHSLLALDDD ASRRRSSNNS NAIQLQKILQ MNPNTRGDLA EKDMVHGYSP 300
SPDSASASAS SSPGSSSASM KSESFLNALW GLSPKIMVVT EQDFNHNSSN LMDRLLESLN 360
SYAALFDCLE CTVSRASLDR IKIEKMLLGE EIKNIVACEG AERRERHEKM DKWIQRLDLS 420
GFANVPFSSQ GVTQAMRFLE NYGCNGYRMR EENGCAVIYW QDRTLFSVTA WRSRR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
