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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G163700.1 |
Common Name | PHAVU_002G163700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 323aa MW: 35266.7 Da PI: 8.5452 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G163700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 120 | 170 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ rg+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Phvul.002G163700.1 120 LYRGVRQRH-RGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 170
59******9.8*********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MDGMQERNSE LGTDIGSSLS NLILTGGSNA LDSIFSNCCP PTNASSSNSV LDHLEPFGCS 60 GFEPLGSSVY LRQRDILQKF YQENRGNGSF LPTSLANPSM NSVYTSSLTS SLTNPCKKKL 120 YRGVRQRHRG KWVAEIRLPQ NRMRVWLGTY DTAEAAAYAY DRAAYKLRGE YARLNFPNLK 180 DPTKLGFGDS ARLNALKSSV DAKIQAICQK VKRERAKKIA AKKLSSATAH ATRKQSEKIN 240 SSASSSSSSL PLSPSSIFCD NWANELFSPS VSEDGIWKGE NSPASVSMEC PTMVTDDTEF 300 EGCSLARLPS FDPELIWEVL AI*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |