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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G162500.1 |
Common Name | PHAVU_002G162500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 314aa MW: 35023.9 Da PI: 5.4308 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G162500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.9 | 3.5e-20 | 106 | 156 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa +++a+ kl+g
Phvul.002G162500.1 106 KKFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAALVYDNAAIKLRG 156
59********.**********84....34*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MTTPPTKYTH HTKLLTLSHH PPQNPYPRLV RITVTDADAT DSSSDEEQTF HSSKRLRQRH 60 RKFINEISIE PCAGNNNGVF SRKRVRSRSV VGKDRVAETP RASTVKKFRG VRQRPWGKWA 120 AEIRDPSRRV RLWLGTYDTA EEAALVYDNA AIKLRGPDAL TNFITPPATW HNEDPTPAPN 180 GYASAEETQN KTLFSPTSVL HSCSLSEEAE SIAGKDDDYS SVPESSKAKA ESLFPIPSEL 240 KFDFQDCLAA PEMFGELDSA AAAESVLFSD DDWPGVFLTA CEDLGLKSWH TDRNQEFFQD 300 IDDLFVSDPL LAL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |