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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G144900.1 |
Common Name | PHAVU_002G144900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
Dof |
Protein Properties |
Length: 345aa MW: 37051.8 Da PI: 8.6309 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G144900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.8 | 1.4e-39 | 35 | 95 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++
Phvul.002G144900.1 35 QEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVR 95
57899*****************************************************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010052 | Biological Process | guard cell differentiation |
GO:0010118 | Biological Process | stomatal movement |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MSPDDIPPSK PATTATTDQE TQSSGGRKGS STRPQEQGLK CPRCDSPNTK FCYYNNYSLT 60 QPRHFCKTCR RYWTKGGALR NVPIGGGCRK NKKVRSSRLS CDSKDSGSSS SDLVGGLKFL 120 HALPPSMDFH LGGLPFPRLH HHPPATYNQF SSFGDTSSAS SCFNLDPSPG TTPSSFAALN 180 YPFSYNGAIQ GMSAMNVHSG HASSIESLSS INQDLHWKLQ QQRLAMLFGG DNNQKDHSGS 240 GGVSSAANHL ENQTQKPQPI LFQNLEVSKA GIFPVENCRK EHGPSGDTHT PSTEWFFGNS 300 YASVTPTPTA TTTSSGGPRN DNASNWSSGV NAWGDVPQQY TALP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |