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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G103400.1 |
Common Name | PHAVU_002G103400g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 438aa MW: 47794.9 Da PI: 7.9792 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G103400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.2 | 9.7e-30 | 170 | 226 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgs+f+rsYY+Ct+++Cpvkkk+e + +++v+ i+Y+geHnh+
Phvul.002G103400.1 170 DDGYNWRKYGQKPVKGSNFSRSYYKCTHPNCPVKKKLELTL-QGHVTAIIYKGEHNHQ 226
8**************************************99.9**************8 PP
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2 | WRKY | 107.1 | 8.5e-34 | 327 | 385 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+
Phvul.002G103400.1 327 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVVTTYEGKHNHD 385
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MLGGGNGDGE AAPPSTAARS RSDLRPRAST ESVFNCGDTA GYSPGPMTLF SSLFGDGDGD 60 EYKSFSEFLA GAMVDPIPLR SSPDSASQGQ FGMTQQQMLA QVTAHTNVQI QAEHATSLTQ 120 VPTTISTTVP QLISLPPPSM SASGVTKSFG FFHSQQKLHS PSIIVDKPND DGYNWRKYGQ 180 KPVKGSNFSR SYYKCTHPNC PVKKKLELTL QGHVTAIIYK GEHNHQRKTT KGTLTSSGNS 240 DRLKEEMSSH SMSQVDLEFS QAEHGSGTSD SEEVGYYETE VDEKNDEPDP KRRNTKAKLE 300 DPASLNLHRT VAESRIIVQT TSEVDLLDDG YRWRKYGQKV VKGNPYPRSY YKCTTPGCNV 360 RKHVERASTD PKAVVTTYEG KHNHDVPTVK TNSHTLANNT ASQLKPKNVT DEKHGFSSRG 420 VGGYEQGPVA SLTLKQE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-114 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |