 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.002G089700.1 |
| Common Name | PHAVU_002G089700g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
WRKY |
| Protein Properties |
Length: 439aa MW: 48142 Da PI: 7.7677 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.002G089700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.5 | 1.8e-30 | 144 | 203 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt + Cpv+k+v+r+aed +++++tYeg+Hnh+
Phvul.002G089700.1 144 MNDGCQWRKYGQKMAKGNPCPRAYYRCTVSpLCPVRKQVQRCAEDMSILITTYEGTHNHP 203
58**************************998****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 439 aa
Download sequence Send
to blast |
MEQAREENKM LKFLDILEQD KPEDATNAKG VSSQSEESEP LSLSLGISFK GKIKGKRKQD 60
EGMDRGLTLG LDINLDPVDH AEAANISSSA SSLGGGKEEE PSEMWPPSKV LKTMKNVDKS 120
EAFQNDQPKK TRVSIRARCD TQTMNDGCQW RKYGQKMAKG NPCPRAYYRC TVSPLCPVRK 180
QVQRCAEDMS ILITTYEGTH NHPLPMSATA MACTTSAAAS MLQCPSLSSE HGHGLVNSAI 240
SSITKFSAPN YNPHNALNFS TYQISRPHQF YFPNSSISSL NYHPTITLDL TAPPTASNSS 300
FPHMPKYSST NLNFSSDFSP PQSIMPPSPW SSYSGYFNSR ALTHNINHGG YFLNPGSQNQ 360
PLEHLHQPIC MTNNNFPQRF LPDSIIAATK AITSNPKFHS VLATALTTYV GNGASGDTLR 420
ENHVLENAEL SLKLCSEK*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 1e-153 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
