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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G016700.1 |
Common Name | PHAVU_002G016700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 172aa MW: 18862.2 Da PI: 8.7103 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G016700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.4 | 3.2e-17 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
Phvul.002G016700.1 31 RYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 80
7******99.**********9...336*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0010941 | Biological Process | regulation of cell death |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MEGEGRRREE GQREPTRKRS GVAVAVEGER RYKGIRMRKW GKWVAEIREP NKRSRIWLGS 60 YSTPVAAARA YDTAVFYLRG PSARLNFPDL LVGEGTTLVA GCDMSAASIR KKATEVGARV 120 DALQATLHHH HVAPAAQELL SRGDGGGSGD FAVDLNKMPE PESEDCEWDV N*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 6 | 18 | RREEGQREPTRKR |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |