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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.002G008800.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
MYB |
Protein Properties |
Length: 361aa MW: 41081.5 Da PI: 7.9325 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.002G008800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 34.4 | 5.3e-11 | 37 | 77 | 9 | 48 |
HHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 9 dellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
d +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl
Phvul.002G008800.1 37 DAKLKAYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 77
5699***********************************97 PP
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2 | Myb_DNA-binding | 37 | 7.7e-12 | 84 | 126 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++
Phvul.002G008800.1 84 GGFSEEEDNIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 126
569******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MRFNHFNLSP LVPLLAPCTR LFSLLFLLIY IYIAPRDAKL KAYIEQHGTG GNWIALPQKI 60 GLKRCGKSCR LRWLNYLRPN IKHGGFSEEE DNIICSLYVS IGSRWSIIAA QLPGRTDNDI 120 KNYWNTRLKK KLLGKQRKEQ QAQARRVSGN RQKQDVKRET ENLIVASELI NQVPYWSAEY 180 SSVPMPVTDV SFQHYGLNNQ TSLRNLMVNK LEGIRFSNDH QQQQQPYTNA CEIPSLPNQV 240 FPTMVNHVAV VSDENNSVTY QPSNVFQGFE NFPSDFCELV CVNSQQMDRS MESFNYGMES 300 MDVMSNGGST NTTSTESTSW GDMSSLVYSP LVSDYEGCRQ GNPRDVVAFE ECKYFGMPMQ 360 *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |