PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G188300.1
Common NamePHAVU_001G188300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 504aa    MW: 56157.7 Da    PI: 6.3295
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G188300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10169228160
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                         eke +r rr   NRe+Ar   +R++a +eeL++k+++L  eN++Lkke +   ke+++l+
  Phvul.001G188300.1 169 EKEARRIRRVLANRESARQTIRRRQALCEELTNKAATLVVENESLKKEKDLALKEYQSLE 228
                         799******************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-6166228No hitNo description
PfamPF001701.1E-9169229IPR004827Basic-leucine zipper domain
SMARTSM003382.2E-8169233IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243171234IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.58E-6173227No hitNo description
CDDcd147026.03E-14174225No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MDAESEKRAS AAVSRSSLYE HMDRLVGTEE MEAAETLAQL AMRDSHYTDK WCTKPSAIPE  60
LHLSPTLSSS SDLSLHLSPT TLHSDPSIDA VDQAIAGEQL DEKVPTSASV EAERTEQDKC  120
SEHMEVEQDA NLLHNSSNLE VEQDANLFHI SSNILGRFNK PRRILTEEEK EARRIRRVLA  180
NRESARQTIR RRQALCEELT NKAATLVVEN ESLKKEKDLA LKEYQSLEIT NKYLKAQIAK  240
SINTEVEKTP VEPESSVAEV TPSSGNSPWF LYNHFPVQHV FWPSPLQPTY PVHLPNTSFN  300
SVIIPSIANV PCSSESESYH KQNSLINDKQ TPNPFYMFPC PWIFPCPQFA NGQSSPSCSL  360
KDKQNNLSLG KPCSSSSSLN TLANVDYQAW TEARLINNPS RFSLDGGEKI TGCHIIENYH  420
GPALGCNGHA SAFEQENERQ LHSAPNNKAS VNIAASSLEQ KQEQFICQGK SLADAVAAAE  480
ARKRRKELTK QKSIHNRHPR MQC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1481486RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G188300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007162879.10.0hypothetical protein PHAVU_001G188300g
TrEMBLV7CZP30.0V7CZP3_PHAVU; Uncharacterized protein
STRINGXP_007162879.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-36bZIP family protein