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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.001G176100.1 |
Common Name | PHAVU_001G176100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 306aa MW: 35148.8 Da PI: 8.7991 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.001G176100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.4 | 4.8e-52 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhP+deel+v+yL++kv++++l+ ++i+e+d+yk++Pw+L++k+ +e+ewyfF++rd+ky++g r+nra++sgyWkatg+dk+
Phvul.001G176100.1 15 LPPGFRFHPSDEELIVHYLRNKVTSSPLPG-SFIAEIDLYKYNPWELRSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKP 104
79***************************9.89**************977777999*********************************** PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++ + +++g+kk Lvfy grapkg+ktdW+mheyrl
Phvul.001G176100.1 105 IFTScGMKNIGVKKALVFYMGRAPKGSKTDWIMHEYRL 142
**9977888***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MFIFMDKDAN LEIQLPPGFR FHPSDEELIV HYLRNKVTSS PLPGSFIAEI DLYKYNPWEL 60 RSKALFGEDE WYFFTPRDRK YPNGVRPNRA AASGYWKATG TDKPIFTSCG MKNIGVKKAL 120 VFYMGRAPKG SKTDWIMHEY RLQNSMISIP QQRGSMRLDE WVLCRVRQKT GSTRSTWEDS 180 NESIHEPTRH FPEMNKNSNP EPAKNCIGIA SGSGFGCNND VKAYASWYDD NSNIVIGAQF 240 MAPVTEGLFN PLKRKNIEEN DRLDLLNKKI SEEVDVGKQR VEKDVNKGYN FNNFDHWTSI 300 IQPRV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 1e-128 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |