PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G077200.1
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 307aa    MW: 33496.1 Da    PI: 6.3143
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G077200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.84.1e-12131185155
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         ek+  + r k +NRe+ArrsR+RK+a ++ Le  v+ L +eN+ L ++l+  +++
  Phvul.001G077200.1 131 EKAQVKMRTKNSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFNQLNDASQQ 185
                         56667788899**********************************9666555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-9128195IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76133196IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.47E-10136185No hitNo description
PfamPF001704.5E-9136183IPR004827Basic-leucine zipper domain
PROSITE patternPS000360138153IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.2E-8140171No hitNo description
CDDcd147022.65E-8149187No hitNo description
Gene3DG3DSA:1.20.5.105.1E-5172205No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEAKLGGGGG GVMAATLDDI KWISFMFDHD INDDVKPCKL DHFTGASGHL NDAFQNLDAV  60
TAFSTCGGIT DSILAHFQDL TPIQSTISAT IDSQSSICGP VKRRRSRQWE KEAVDSEEGE  120
GSGCASEERN EKAQVKMRTK NSNRESARRS RRRKQAHLAD LEWQVERLRQ ENSHLFNQLN  180
DASQQFRDAD TNNRVLKSDV EALRAKVKLA EEMVRRGTIT PFNNQILPSQ TQLSTVSVLN  240
TNNNNLRRMA HVSPTITVHG NDGASYGGGI SVSGETSSPL LLGNLDIASS DFNSDNGVSS  300
ITSMWA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147154RRSRRRKQ
2149154SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G077200.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150366e-63AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007161531.11e-147hypothetical protein PHAVU_001G0772001g, partial
TrEMBLV7CW721e-146V7CW72_PHAVU; Uncharacterized protein (Fragment)
STRINGXP_007161531.11e-147(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-29basic leucine zipper 9