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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.001G059900.2 |
Common Name | PHAVU_001G059900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 341aa MW: 38092 Da PI: 9.5857 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.001G059900.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 177.8 | 2.9e-55 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL++k+++++++ ++i+ vd++k+ePwdLp k+k ++kewyfF rd+ky+tg r+nrat++gyWk+tgkdke
Phvul.001G059900.2 14 LPPGFRFHPTDEELISYYLTNKISDSNFTG-KAIAVVDLNKCEPWDLPGKAKMGQKEWYFFNLRDRKYPTGVRTNRATNTGYWKTTGKDKE 103
79*************************999.88***************999999************************************* PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+l++ ++elvg+kktLvfykgrap+gekt+Wvmheyr+
Phvul.001G059900.2 104 ILNSvTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRI 141
**9989999***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MEGTRDEKKK EETLPPGFRF HPTDEELISY YLTNKISDSN FTGKAIAVVD LNKCEPWDLP 60 GKAKMGQKEW YFFNLRDRKY PTGVRTNRAT NTGYWKTTGK DKEILNSVTS ELVGMKKTLV 120 FYKGRAPRGE KTNWVMHEYR IHSKSTFKID KQDEWVVCRV FRKSGGARKF PSNSNHTNTR 180 TLNPYSVEVG PSIVPPPMMH LGDPSAHFNF PYGSRNPSEL LRGGGSTSAN VMNLPTMHPH 240 FNNPAAAGAE TAGFTISGLN LNLGGATTQT QPFLRPMMPP PHPLSVAQLN HDFSSNMVTH 300 TALAAHNVGY GADMANANSH GNRYMAMDHC MDLDNYWPSY *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-54 | 13 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-54 | 13 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-54 | 13 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-54 | 13 | 169 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-54 | 13 | 169 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-54 | 13 | 169 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 1e-124 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |