PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G009000.3
Common NamePHAVU_001G009000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 560aa    MW: 61489.9 Da    PI: 6.8999
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G009000.3genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11402460563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR++A rs +RK  +i eLe kv++L++e ++L  +  +l+   ++lkse+
  Phvul.001G009000.3 402 KRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSEN 460
                         9********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-14398462IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955400463IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.4E-11402458No hitNo description
SuperFamilySSF579594.08E-10402457No hitNo description
PfamPF001701.7E-10402460IPR004827Basic-leucine zipper domain
CDDcd147031.61E-13403475No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MTRVESMEGV DQSNMKRNGC VFGSSSGANL RPPNRLNNAV AISQMGVAEN QKPYGIPPSY  60
PNTNISPSSP YPQFFGSQSH SNSVSQRLGS PNLSSASSHS RSLSQPPFFS LDSLPPLSPS  120
PYREPSLSDP ISTDVSAEES LVNPHAPLPN RGPALQLGHS LPPRKGHRRS SSDSPLGISD  180
FIQSAPQLVP SRTWSDRDGS RGGNSGYEKP IQLVLKEPIK DMDRADGFGV EPMVGRKEDD  240
ALDDLFSAYM NLDNIDGLNF SGMEDKDLDS RTSGSKTVES SDNEVESHAN GKTTGAQGAS  300
SSCSEERREG VKRSSDGDIA PGSRHRRSFS LDSSIGNFHI GDESPKLPPL QNRGGQHSPS  360
NSMDGKTSET SIEFGNGEFS SEELKKIKEN DKLAEIAMAD PKRAKRILAN RLSAARSKER  420
KMRYISELEL KVQTLQTETT TLSTQFTKLQ MDNSELKSEN NEYKLRIQAF EQQSQLKDAL  480
NETLDAEVRR LRRMVAELGG ETLLSSRMAQ QLAISQQMFP LQQHQQHPNQ LRHAQLHNNH  540
SQEQTQTQSQ RQNGKATAY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G009000.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007160693.10.0hypothetical protein PHAVU_001G009000g
TrEMBLV7CR790.0V7CR79_PHAVU; Uncharacterized protein
STRINGXP_007160692.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.37e-68bZIP family protein