PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.001G009000.3 | ||||||||
Common Name | PHAVU_001G009000g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 560aa MW: 61489.9 Da PI: 6.8999 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 402 | 460 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR++A rs +RK +i eLe kv++L++e ++L + +l+ ++lkse+ Phvul.001G009000.3 402 KRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSEN 460 9********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.7E-14 | 398 | 462 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.955 | 400 | 463 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.4E-11 | 402 | 458 | No hit | No description |
SuperFamily | SSF57959 | 4.08E-10 | 402 | 457 | No hit | No description |
Pfam | PF00170 | 1.7E-10 | 402 | 460 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.61E-13 | 403 | 475 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence Send to blast |
MTRVESMEGV DQSNMKRNGC VFGSSSGANL RPPNRLNNAV AISQMGVAEN QKPYGIPPSY 60 PNTNISPSSP YPQFFGSQSH SNSVSQRLGS PNLSSASSHS RSLSQPPFFS LDSLPPLSPS 120 PYREPSLSDP ISTDVSAEES LVNPHAPLPN RGPALQLGHS LPPRKGHRRS SSDSPLGISD 180 FIQSAPQLVP SRTWSDRDGS RGGNSGYEKP IQLVLKEPIK DMDRADGFGV EPMVGRKEDD 240 ALDDLFSAYM NLDNIDGLNF SGMEDKDLDS RTSGSKTVES SDNEVESHAN GKTTGAQGAS 300 SSCSEERREG VKRSSDGDIA PGSRHRRSFS LDSSIGNFHI GDESPKLPPL QNRGGQHSPS 360 NSMDGKTSET SIEFGNGEFS SEELKKIKEN DKLAEIAMAD PKRAKRILAN RLSAARSKER 420 KMRYISELEL KVQTLQTETT TLSTQFTKLQ MDNSELKSEN NEYKLRIQAF EQQSQLKDAL 480 NETLDAEVRR LRRMVAELGG ETLLSSRMAQ QLAISQQMFP LQQHQQHPNQ LRHAQLHNNH 540 SQEQTQTQSQ RQNGKATAY* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.001G009000.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007160693.1 | 0.0 | hypothetical protein PHAVU_001G009000g | ||||
TrEMBL | V7CR79 | 0.0 | V7CR79_PHAVU; Uncharacterized protein | ||||
STRING | XP_007160692.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 7e-68 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Phvul.001G009000.3 |
Entrez Gene | 18640000 |