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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.001G009000.1 |
Common Name | PHAVU_001G009000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bZIP |
Protein Properties |
Length: 561aa MW: 61646 Da PI: 7.0558 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.001G009000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 403 | 461 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR++A rs +RK +i eLe kv++L++e ++L + +l+ ++lkse+
Phvul.001G009000.1 403 KRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSEN 461
9********************************************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 561 aa
Download sequence Send
to blast |
MTRRVESMEG VDQSNMKRNG CVFGSSSGAN LRPPNRLNNA VAISQMGVAE NQKPYGIPPS 60 YPNTNISPSS PYPQFFGSQS HSNSVSQRLG SPNLSSASSH SRSLSQPPFF SLDSLPPLSP 120 SPYREPSLSD PISTDVSAEE SLVNPHAPLP NRGPALQLGH SLPPRKGHRR SSSDSPLGIS 180 DFIQSAPQLV PSRTWSDRDG SRGGNSGYEK PIQLVLKEPI KDMDRADGFG VEPMVGRKED 240 DALDDLFSAY MNLDNIDGLN FSGMEDKDLD SRTSGSKTVE SSDNEVESHA NGKTTGAQGA 300 SSSCSEERRE GVKRSSDGDI APGSRHRRSF SLDSSIGNFH IGDESPKLPP LQNRGGQHSP 360 SNSMDGKTSE TSIEFGNGEF SSEELKKIKE NDKLAEIAMA DPKRAKRILA NRLSAARSKE 420 RKMRYISELE LKVQTLQTET TTLSTQFTKL QMDNSELKSE NNEYKLRIQA FEQQSQLKDA 480 LNETLDAEVR RLRRMVAELG GETLLSSRMA QQLAISQQMF PLQQHQQHPN QLRHAQLHNN 540 HSQEQTQTQS QRQNGKATAY *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |