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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pgl014788 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family |
NAC |
| Protein Properties |
Length: 133aa MW: 15041.3 Da PI: 10.1063 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pgl#S25731169 | PU_ref | Unigene | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 153.2 | 1.2e-47 | 13 | 133 | 1 | 121 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99
lppGfrF Ptdeelvv+yL++kv +++l++ +i +vd+yk++Pw+Lp+k+ +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk++++ +++
Pgl014788 13 LPPGFRFFPTDEELVVHYLCNKVVSHPLPA-FIIGDVDLYKYDPWQLPEKALFGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPITTCgGRKR 111
79***************************9.67***************8888899*************************************99866777 PP
NAM 100 vglkktLvfykgrapkgektdW 121
vg+kk Lvfykg+apkg+kt+W
Pgl014788 112 VGVKKALVFYKGKAPKGSKTNW 133
********************** PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 133 aa
Download sequence Send
to blast |
MTQKGGLEGQ IDLPPGFRFF PTDEELVVHY LCNKVVSHPL PAFIIGDVDL YKYDPWQLPE 60
KALFGEKEWY FFTPRDRKYP NGSRPNRAAG SGYWKATGAD KPITTCGGRK RVGVKKALVF 120
YKGKAPKGSK TNW
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-63 | 10 | 133 | 14 | 135 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-63 | 10 | 133 | 14 | 135 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-63 | 10 | 133 | 14 | 135 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-63 | 10 | 133 | 14 | 135 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swm_B | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swm_C | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swm_D | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swp_A | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swp_B | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swp_C | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3swp_D | 3e-63 | 10 | 133 | 17 | 138 | NAC domain-containing protein 19 |
| 3ulx_A | 4e-63 | 1 | 133 | 3 | 133 | Stress-induced transcription factor NAC1 |
| 4dul_A | 3e-63 | 10 | 133 | 14 | 135 | NAC domain-containing protein 19 |
| 4dul_B | 3e-63 | 10 | 133 | 14 | 135 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in stems, leaf blades and callus. Weakly expressed in developing flowers. {ECO:0000269|PubMed:10660065}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Taga Y, et al.
Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
Plant Signal Behav, 2009. 4(8): p. 740-2
[PMID:19820348] - Xia N, et al.
Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
Mol. Biol. Rep., 2010. 37(8): p. 3703-12
[PMID:20213512] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
Mol. Genet. Genomics, 2010. 284(3): p. 173-83
[PMID:20632034] - Nakayama A, et al.
Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
BMC Plant Biol., 2013. 13: p. 150
[PMID:24093634] - Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
[PMID:26766411]
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