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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pgl013039 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
NAC |
Protein Properties |
Length: 219aa MW: 25246.1 Da PI: 4.9545 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Pgl#S55343992 | PU_unref | Unigene | View CDS |
PUT-175a-Picea_glauca-4502 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 99.5 | 4.7e-31 | 20 | 100 | 1 | 82 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82
lppGfrFhP deelv++yL++kv ++++++ ++i+evd++k+ePwdLp k+k +ekewyfFs rd+ky+tg+r+nrat++g+
Pgl013039 20 LPPGFRFHPMDEELVTYYLTQKVLDSSFSC-RAITEVDLNKCEPWDLPDKAKMGEKEWYFFSLRDRKYPTGTRTNRATEAGI 100
79****************************.89***************99999**************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MELVNVNSKE QMNKMDDELL PPGFRFHPMD EELVTYYLTQ KVLDSSFSCR AITEVDLNKC 60 EPWDLPDKAK MGEKEWYFFS LRDRKYPTGT RTNRATEAGI HPNSYIYKTQ TDIANDRFKQ 120 CKMEPPSPLF KSSGTLKNLT VQPSSSQWIN TSSGYQHPNQ DNLEPKYGVA QQQMQNQPMV 180 SHSQETGLST EMNAEISSVV SSQRNQPYHE DAQDMDSIW
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-28 | 20 | 99 | 17 | 96 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-28 | 20 | 99 | 17 | 96 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-28 | 20 | 99 | 17 | 96 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-28 | 20 | 99 | 17 | 96 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swm_B | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swm_C | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swm_D | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swp_A | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swp_B | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swp_C | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
3swp_D | 2e-28 | 20 | 99 | 20 | 99 | NAC domain-containing protein 19 |
4dul_A | 2e-28 | 20 | 99 | 17 | 96 | NAC domain-containing protein 19 |
4dul_B | 2e-28 | 20 | 99 | 17 | 96 | NAC domain-containing protein 19 |