PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Expression |

Basic Information? help Back to Top

TF ID

Pgl011516

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Trihelix

Protein Properties

Length: 284aa MW: 34131.4 Da PI: 5.5244

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S40953070	PU_unref	Unigene	View CDS
gnl\|UG\|Pgl#S55335569	PU_unref	Unigene	View CDS
PUT-175a-Picea_glauca-5648	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30	1.4e-09	29	73	1	45
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergfer 45 +W +qe+++ i++r e+e+++ ++k++k+lWe ++ km+++ e Pgl011516 29 QWGHQETREFIAIRAELEKDFTQTKRNKTLWEIIAGKMKSKDTEE 73 7*************************************8876654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.6E-7	29	112	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence Send to blast
MAALPLQSPS MDAEMNQCQL KRKDDRIPQW GHQETREFIA IRAELEKDFT QTKRNKTLWE 60 IIAGKMKSKD TEEAQSSVNA SGKILLTATR AKKPQGQIME DSALFFEELD AIFKERERNM 120 DRLLLESKAG MKPKEKVRRF KRLLGEKSSD DYSEDEEDEE DDSEEEKIIK RKKSKADKER 180 QRVTADKYRA NSMQEVLEDF FQQQQRFEEQ WREAVEGREE ERRLREREWR IAMEKLEKER 240 VMKEQAWRER EDQRRAREEV RAERRDELFA ALINKLTQEE RSHI

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.27317	0.0	stem

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024381970.1	4e-73	trihelix transcription factor GT-3b-like
TrEMBL	A9P2A3	1e-124	A9P2A3_PICSI; Uncharacterized protein
STRING	PP1S285_47V6.1	2e-72	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	2e-14	Trihelix family protein