PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009731
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 414aa    MW: 46653.6 Da    PI: 6.1023
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55348476PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-41637PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.71e-31321742128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tk..sgyWk 84 
                p  ++F+Ptd+el+ e+L+ k++ ++      ++++   i+   +i++++P++Lp  ++ +    +fF++ +k+y+tg+rk+r+       t+  + +W+
  Pgl009731  32 PSRVKFDPTDQELI-EHLQGKISFDNstphplIDEFIPtIEGGdGICYTHPEKLP-GISRDGLVRHFFHRPSKAYTTGTRKRRKiqtpcdeTSegETRWH 129
                6669**********.99****998886776443333333555545**********.565666688******************867787773333667** PP

        NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +tgk+++vl+ +g ++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Pgl009731 130 KTGKTRPVLV-NGMQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 174
                **********.999***********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3619193IPR003441NAC domain
PROSITE profilePS5100531.47931193IPR003441NAC domain
PfamPF023653.1E-1433174IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
XVPTNYILAF SYCTYKEFFF WSQALQDWPG LPSRVKFDPT DQELIEHLQG KISFDNSTPH  60
PLIDEFIPTI EGGDGICYTH PEKLPGISRD GLVRHFFHRP SKAYTTGTRK RRKIQTPCDE  120
TSEGETRWHK TGKTRPVLVN GMQKGCKKIL VLYTNFGKHR KPEKTNWVMH QYHLGSQEEE  180
KEGELVVSKV FYQTQPRQCN WEKATDAGDT CKAGITEATQ VPERFTAGEN VSSTDRHIYS  240
AHDPLDQQAK SLTAPTNLSL AQSRSESSDQ GIDSKSPEST HCTPSSGDGI VDLHLNKDTH  300
LVKPCDHCNN IITREDRTAC GSQEEPRDHL PNLHESHLTN LLFCHETLQT GAVNSNAKFQ  360
RYGSLDLEDL AAELGLPLDQ KTNSEIFADT ASVTKEVQEA LSNSQEADWL QYFG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_010244406.11e-105(Nelumbo nucifera)
STRINGXP_010267095.11e-105(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-108NAC domain containing protein 75