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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pgl007123 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
ERF |
Protein Properties |
Length: 212aa MW: 23907.3 Da PI: 8.2062 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Pgl#S55351171 | PU_unref | Unigene | View CDS |
PUT-175a-Picea_glauca-5310 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.5 | 2.5e-16 | 2 | 46 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
r ++ +gr++AeIrdp + ++r++lg+f+taeeAa+a++ a+++l+g
Pgl007123 2 RKRP-WGRFAAEIRDPMK---KTRVWLGTFDTAEEAARAYDSAARALRG 46
5677.**********843...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
XRKRPWGRFA AEIRDPMKKT RVWLGTFDTA EEAARAYDSA ARALRGSKAK TNFAIVPPCD 60 DRSTSLSSTV ESWSSPKNNT NNNTRRSLSL NKTEDIRHKI DLNIAQEEFG RKSASPYLED 120 KIPNISKKQK IFKRSCAPDR AAEAYNWSRQ QYPQRGLDPN ACHSDCDSSS SVVDDDEVGT 180 SSLRPQGIRL LPDLNLPPCD EEEDFSSMLL HL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 3e-17 | 2 | 55 | 7 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 3e-17 | 2 | 53 | 19 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein
? help Back to Top |
Source |
Hit ID |
E-value |
Description |
TrEMBL | A0A0C9QXH7 | 6e-78 | A0A0C9QXH7_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_1413_2210 transcribed RNA sequence |