 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pgl006502 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
GRAS |
| Protein Properties |
Length: 237aa MW: 27061.1 Da PI: 7.5508 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pgl#S55337699 | PU_unref | Unigene | View CDS |
| PUT-175a-Picea_glauca-2082 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 57.7 | 2.4e-18 | 2 | 74 | 47 | 122 |
GRAS 47 eALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqG 122
e+L arl ++ly++l+ +et+ + + l+a++l+++v+P+++f++++a ++Ilea+++ee+vHiiDf+i+ G
Pgl006502 2 EGLVARLGPLAQSLYNTLKWKETP---TRDILSATRLLYNVCPYIEFGYVAAISTILEALKEEEKVHIIDFEIGGG 74
8999*****9************99...899*******************************************987 PP
|
| 2 | GRAS | 172.2 | 4e-53 | 79 | 228 | 223 | 373 |
GRAS 223 erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
+ d++L++vk+l+Pkvv++ve+e+++n+++Fl rf+eal+yy a+f+sl+ +l re+++ri++E+++l+r+ivn+vacegaer+er e ++kWr+r+++a
Pgl006502 79 HLDQLLRMVKGLNPKVVTIVEREMNTNTAPFLPRFMEALNYYLAVFESLDISLQRENRDRINIEKQCLARDIVNIVACEGAERIERYEVAGKWRARMTMA 178
5899************************************************************************************************ PP
GRAS 323 GFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
GF+ +p++++++++++ l + +++ y+++ e+g+l +gW d+ Lv+vSaW
Pgl006502 179 GFTIYPINTTVENSVRPLFESRGNN-YSLKAEKGALHFGWLDKVLVVVSAW 228
***********************66.************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
XEGLVARLGP LAQSLYNTLK WKETPTRDIL SATRLLYNVC PYIEFGYVAA ISTILEALKE 60
EEKVHIIDFE IGGGKPIHHL DQLLRMVKGL NPKVVTIVER EMNTNTAPFL PRFMEALNYY 120
LAVFESLDIS LQRENRDRIN IEKQCLARDI VNIVACEGAE RIERYEVAGK WRARMTMAGF 180
TIYPINTTVE NSVRPLFESR GNNYSLKAEK GALHFGWLDK VLVVVSAWNL ESHSMIK
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
