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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pgl004973 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
ERF |
Protein Properties |
Length: 309aa MW: 34887.9 Da PI: 5.922 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Pgl#S55335346 | PU_unref | Unigene | View CDS |
PUT-175a-Picea_glauca-9535 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 191 | 241 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+++AeIrd + r++lg+f+tae+Aa a+++a+ k++g
Pgl004973 191 HFRGVRRRP-WGKFAAEIRD----SarQGSRVWLGTFDTAEDAAFAYDRAAYKMRG 241
69*******.**********....33334*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MNVLDQIRQH LLGESDGSPS FCTGSPAESC LTENYASSNS WNASDELDSG FVQSALVSDF 60 VEEEQTATEN QPCGGTRFSR PVLSITVPRR ECFEWERRSV SWGVDSRNFV TACCPASIRR 120 CLSCEWGKLP LDENDSEDMV LLGVLKEATQ KGWTPLTPKE TKNADVRKQI NPRQETGHKL 180 SEKEKKSGER HFRGVRRRPW GKFAAEIRDS ARQGSRVWLG TFDTAEDAAF AYDRAAYKMR 240 GTKALLNFPL DVVSKSMDTL REDESCCRKR KLNEQAVRGE EKRPKSEQCG VDSEESIVVE 300 DGEQKRFAR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2gcc_A | 1e-30 | 190 | 254 | 4 | 68 | ATERF1 |
3gcc_A | 1e-30 | 190 | 254 | 4 | 68 | ATERF1 |