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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pgl003560 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
ERF |
Protein Properties |
Length: 387aa MW: 42598.1 Da PI: 4.7883 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Pgl#S55345488 | PU_unref | Unigene | View CDS |
PUT-175a-Picea_glauca-43679 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.8 | 3.5e-20 | 181 | 230 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g
Pgl003560 181 LYRGVRQRH-WGKWVAEIRLPRD---RTRLWLGTFDTAEEAAMAYDKAAYRLRG 230
59******9.**********966...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MDLITERLNS EGPDRQGFTF PTLVRHQNLG FSNSSVQEMF EESASSSSSP SNGDAKLEGL 60 DAWQNLRMPE ASQAFGNSEI LCSSSSFFPN LPSNGFGHSD GLVWRPSFQG QNQCSGESIG 120 SAMILYDLLH VQQIQQLQQQ LQLQQHQSAA ASIHQMGRNP LGPRAQPMKL HSSGLSKAAK 180 LYRGVRQRHW GKWVAEIRLP RDRTRLWLGT FDTAEEAAMA YDKAAYRLRG DYARLNFPHL 240 KRHLEANSFA PWTGNSVLPS AVDAKLQAIC QSLKLPMEKM SKTEESEEIS CAYENSGSLG 300 SVQDEDAKKN DVVSVKSETC ESDSSDDSTI TALNSAGESE SPSASKSETQ ADTETDTLCS 360 MPSFSASSIW AELDDYLLSI PSLDINW
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