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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pgl001271 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
MYB_related |
| Protein Properties |
Length: 150aa MW: 17093.2 Da PI: 4.4353 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pgl#S55336682 | PU_unref | Unigene | View CDS |
| PUT-175a-Picea_glauca-21385 | PU_unref | plantGDB | View CDS |
| PUT-175a-Picea_glauca-26034 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.4 | 2.8e-07 | 42 | 82 | 6 | 44 |
HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 6 teEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
+eE +++ +a + + ++ +W+ +a+++g g+ + ++k ++
Pgl001271 42 AEENKIFENALAIYDKDtpdRWHNVASMVG-GKNPDEVKRHY 82
8*****************************.**********9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MMNLEYPSMV IVQNVRSEQR KESIFNFNCG GNVQQIFGGM DAEENKIFEN ALAIYDKDTP 60
DRWHNVASMV GGKNPDEVKR HYEILLEDLN CIEAGKVPIP NYTFDITTKD EVPVHYKDGG 120
EDGQVTVSGS NDTVVWTNEE QRLLMHLKIQ
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the micropylar endosperm surrounding globular-stage embryos but no expression was detected elsewhere, including floral tissues. {ECO:0000269|PubMed:17672842}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
